A computational platform is designed for analyzing 1000 Genomes data in VCF format according to Atlas processing manuals. The platform has all the necessary pre-installed bioinformatics tools, packages and pre-uploaded sample data. VCF data storage scheme is available within the Atlas manuals. The platform’s functional scope is limited by the pre-installed packages (BCFtools, VCFtools, KING, Plink) and can be utilized for any other applicable applications.
- VCF subsetting and converting.
- Relationship analysis.
- Principal component analysis.
- Populational allelic metrics calculation.
- 23andMe data generation.