Atlas 1000 Genomes Data Analysis

About

A computational platform is designed for analyzing 1000 Genomes data in VCF format according to Atlas processing manuals. The platform has all the necessary pre-installed bioinformatics tools, packages and pre-uploaded sample data. VCF data storage scheme is available within the Atlas manuals. The platform’s functional scope is limited by the pre-installed packages (BCFtools, VCFtools, KING, Plink) and can be utilized for any other applicable applications.

Use cases
  • VCF subsetting and converting.
  • Relationship analysis.
  • Principal component analysis.
  • Populational allelic metrics calculation.
  • GWAS
  • 23andMe data generation.
Useful links
Vendor
Atlas Biomed
Category
Analytics
Versions
Atlas Biomed